Information on the Australian Aboriginal Metapopulation

The Australian Aboriginal Metapopulation (Australian Aboriginal) consists of 785 haplotypes (at least minimal) which were published in 1 population study.

Most common haplotypes

Count DYS19 DYS389I DYS389II DYS390 DYS391 DYS392 DYS393 DYS385
36 14 13 29 24 11 13 13 11,14
18 14 13 29 24 11 13 13 11,15
17 14 13 29 23 11 13 13 11,14
16 17 12 29 24 10 11 13 12,12
14 14 13 30 24 11 13 13 11,14
14 15 12 27 23 8 12 13 9,18
11 15 13 30 25 10 13 13 9,16
11 15 13 31 24 10 13 13 9,16
10 14 13 29 23 10 13 13 11,14
10 14 13 29 24 10 13 13 11,14
Count DYS391 DYS389I DYS439 DYS389II DYS438 DYS437 DYS19 DYS392 DYS393 DYS390 DYS385
20 11 13 12 29 12 15 14 13 13 24 11,14
13 8 12 12 27 11 14 15 12 13 23 9,18
12 11 13 12 29 12 15 14 13 13 23 11,14
11 10 13 12 30 10 16 15 13 13 25 9,16
10 11 13 13 29 12 15 14 13 12 25 11,14
9 10 13 12 29 8 15 16 14 13 24 12,14
9 10 13 12 31 10 16 15 13 13 24 9,16
8 10 12 11 29 12 15 17 11 13 24 12,12
8 11 13 12 30 12 15 14 13 13 24 11,14
7 10 12 12 28 11 14 15 11 13 24 10,17
Count DYS456 DYS389I DYS390 DYS389II DYS458 DYS19 DYS385 DYS393 DYS391 DYS439 DYS635 DYS392 YGATAH4 DYS437 DYS438 DYS448
10 16 13 25 29 16 14 11,14 12 11 13 23 13 12 15 12 19
8 14 13 24 29 18 16 12,14 13 10 12 21 14 12 15 8 20
7 15 12 23 27 17 15 9,18 13 8 12 23 12 10 14 11 20
7 15 13 21 31 17 16 16,17 13 10 11 21 11 12 14 11 20
7 16 12 24 29 16 17 12,12 13 10 11 22 11 13 15 12 22
6 11 13 25 30 18 15 9,16 13 10 12 26 13 11 16 10 20
6 14 12 22 29 15 14 13,15 13 10 11 24 11 11 16 10 20
6 14 13 24 29 19 15 11,14 13 10 11 21 14 12 15 8 20
6 16 13 24 30 17 14 11,14 13 11 13 23 13 12 15 12 19
6 16 13 24 30 18 14 11,14 13 11 12 23 13 12 15 12 19

 There are no Y23 haplotypes or all haplotypes are singletons.

Count DYS576 DYS389I DYS635 DYS389II DYS627 DYS460 DYS458 DYS19 YGATAH4 DYS448 DYS391 DYS456 DYS390 DYS438 DYS392 DYS518 DYS570 DYS437 DYS385 DYS449 DYS393 DYS439 DYS481 DYF387S1 DYS533
10 18 13 23 29 22 11 16 14 12 19 11 16 25 12 13 38 18 15 11,14 30 12 13 22 35,36 13
8 18 13 21 29 22 11 18 16 12 20 10 14 24 8 14 37 18 15 12,14 28 13 12 24 38,39 12
6 18 13 21 29 22 10 19 15 12 20 10 14 24 8 14 37 18 15 11,14 29 13 11 24 38,39 11
5 17 12 24 29 19 10 15 14 11 20 10 14 22 10 11 41 20 16 13,15 28 13 11 24 37,37 11
5 17 13 21 31 22 10 17 16 12 20 10 15 21 11 11 40 17 14 16,17 28 13 11 27 38,38 11
5 19 13 26 30 22 11 18 15 11 20 10 10 25 10 13 34 19 16 9,16 27 13 12 24 36,36 12
5 20 13 23 30 24 11 17 14 12 19 11 16 24 12 13 38 16 15 11,14 29 13 13 22 35,37 14
4 17 12 21 29 19 11 18 15 12 21 10 16 22 10 11 37 18 16 13,16 32 14 12 23 38,39 9
4 17 12 22 29 22 11 16 17 13 22 10 16 24 12 11 35 20 16 12,12 29 13 11 22 36,38 9
4 17 13 23 29 24 11 17 14 11 19 11 17 23 12 13 37 17 15 11,14 28 13 12 21 35,39 12

 There are no Ymax haplotypes or all haplotypes are singletons.

Discrete-Laplace frequency estimation (Minimal)

Release
R69
Loci included
DYS19, DYS389I, DYS389II*, DYS390, DYS391, DYS392, DYS393
Central haplotypes
14
EM converged
true
EM iterations
44
GLM method
internal_coef
Init method
pam
Threshold frequency
1 in 53,695
Per locus details
DL centers distribution (download PDF)
Table of haplotype centers (click to show/hide)
DYS19 DYS389I DYS389II* DYS390 DYS391 DYS392 DYS393
1 15 14 18 25 10 13 12
2 14 13 17 24 11 13 13
3 15 12 17 22 10 11 13
4 14 13 16 24 11 13 13
5 14 13 16 23 11 13 13
6 14 12 16 23 10 11 13
7 15 14 17 19 10 11 13
8 15 13 16 24 10 12 15
9 15 12 15 23 8 12 13
10 15 13 16 24 10 14 13
11 17 12 17 24 10 11 13
12 16 13 18 21 10 11 14
13 15 13 17 25 10 13 13
14 15 13 17 24 10 11 13

Discrete-Laplace frequency estimation (Y17)

Release
R69
Loci included
DYS19, DYS389I, DYS389II*, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635, YGATAH4
Central haplotypes
17
EM converged
true
EM iterations
143
GLM method
internal_coef
Init method
pam
Threshold frequency
1 in 120,743,388
Per locus details
DL centers distribution (download PDF)
Table of haplotype centers (click to show/hide)
DYS19 DYS389I DYS389II* DYS390 DYS391 DYS392 DYS393 DYS437 DYS438 DYS439 DYS448 DYS456 DYS458 DYS635 YGATAH4
1 15 14 17 24 11 13 12 16 10 11 21 14 19 28 11
2 14 13 16 24 11 13 13 15 12 12 19 16 17 23 12
3 15 13 17 23 10 11 13 14 10 12 20 15 17 22 11
4 14 13 16 24 11 13 13 15 12 12 19 15 17 23 12
5 16 14 18 25 10 13 12 16 10 12 22 13 18 27 11
6 15 14 17 19 10 11 13 14 11 11 23 14 17 24 12
7 15 12 16 24 10 11 13 14 11 12 21 16 17 20 11
8 15 13 16 24 10 12 15 15 10 11 20 14 16 19 11
9 15 12 15 23 8 12 13 14 11 12 20 15 17 23 10
10 14 12 16 22 10 11 13 16 10 11 20 14 15 22 11
11 14 13 16 25 11 14 13 15 12 12 18 17 17 23 12
12 17 12 17 24 10 11 13 15 12 11 22 16 16 22 13
13 15 13 16 24 10 14 13 15 8 12 20 14 19 21 12
14 16 13 18 21 10 11 13 14 11 12 21 15 17 21 12
15 15 13 17 25 11 11 13 14 11 10 20 16 15 23 12
16 15 13 17 25 10 13 13 16 10 12 20 11 18 26 11
17 15 12 17 22 10 11 14 16 10 12 21 15 18 20 12

* Please note that DYS389I was substracted from DYS389II

Population study

  • Henry J., Dao H., Scandrett L. and Taylor D. (2019), 'Population genetic analysis of Yfiler® Plus haplotype data for three South Australian populations', For Sci Int Genet 41:e23-e25 [DOI]
* See FAQ/Glossary (http://yhrd.org/pages/faq) for further explanations of abbreviated terms used here