Information on the Afro-Asiatic - Berber Metapopulation

The Berber Metapopulation (Afro-Asiatic - Berber) consists of 647 haplotypes (at least minimal) which were published in 6 population studies and were additionally submitted via personal communication (1 submission) .

Most common haplotypes

Count DYS19 DYS389I DYS389II DYS390 DYS391 DYS392 DYS393 DYS385
92 13 14 30 24 9 11 13 13,14
28 13 14 30 24 10 11 13 13,14
22 13 14 30 24 9 11 13 13,15
16 13 14 31 24 9 11 13 13,14
16 16 13 31 21 11 11 14 15,17
15 13 13 29 24 9 11 13 13,14
13 13 14 30 24 9 11 13 14,14
12 13 14 30 23 9 11 13 13,14
11 17 13 31 23 11 13 13 11,12
9 13 14 30 24 9 11 14 13,14
Count DYS391 DYS389I DYS439 DYS389II DYS438 DYS437 DYS19 DYS392 DYS393 DYS390 DYS385
76 9 14 10 30 10 14 13 11 13 24 13,14
20 10 14 11 30 10 14 13 11 13 24 13,14
16 11 13 12 31 11 14 16 11 14 21 15,17
14 9 14 10 31 10 14 13 11 13 24 13,14
11 9 14 10 30 10 14 13 11 13 24 14,14
11 11 13 11 31 10 14 17 13 13 23 11,12
10 9 13 10 29 10 14 13 11 13 24 13,14
10 9 14 10 30 10 14 13 11 13 23 13,14
9 9 14 11 30 10 14 13 11 13 24 13,14
9 10 14 11 30 10 14 13 11 13 25 13,14
Count DYS456 DYS389I DYS390 DYS389II DYS458 DYS19 DYS385 DYS393 DYS391 DYS439 DYS635 DYS392 YGATAH4 DYS437 DYS438 DYS448
9 15 14 24 30 18 13 13,14 13 9 10 21 11 12 14 10 20
8 13 13 23 31 16 17 11,12 13 11 11 17 13 11 14 10 20
7 16 14 24 30 18 13 13,14 13 9 10 21 11 12 14 10 20
7 16 14 24 30 18 13 13,14 13 10 11 21 11 12 14 10 20
7 16 14 24 30 18 13 13,14 14 9 11 21 11 12 14 10 20
5 15 12 23 29 16 14 13,16 12 10 11 21 11 11 15 9 20
5 15 14 24 30 17 13 13,14 13 9 10 21 11 12 14 10 20
5 15 14 25 30 17 15 13,14 13 11 12 23 13 12 14 12 19
5 16 15 24 31 18 13 13,14 13 9 11 21 11 13 14 10 20
4 14 13 23 30 18.2 14 13,18 12 11 11 21 11 11 14 10 20

 There are no Y23 haplotypes or all haplotypes are singletons.

Count DYS576 DYS389I DYS635 DYS389II DYS627 DYS460 DYS458 DYS19 YGATAH4 DYS448 DYS391 DYS456 DYS390 DYS438 DYS392 DYS518 DYS570 DYS437 DYS385 DYS449 DYS393 DYS439 DYS481 DYF387S1 DYS533
4 17 14 21 30 18 11 18 13 12 20 9 15 24 10 11 42 22 14 13,14 33 13 10 27 36,37 11
4 19 15 21 31 18 11 18 13 13 20 9 16 24 10 11 42 22 14 13,14 32 13 11 27 36,37 11
3 15 12 21 28 19 11 19 15 11 22 10 16 22 10 11 38 21 16 12,14 27 14 12 21 36,37,38 9
3 16 14 21 31 12 10 15 16 12 19 10 16 21 11 10 40 20 14 15,17 32 13 11 25 36,37 11
3 18 14 22 30 18 11 19 13 12 20 9 16 23 10 11 41 23 14 13,14 32 13 10 25 36,38 12
2 14 13 22 29 18 10 17 14 10 19 10 15 23 9 15 35 19 14 14,15 35 13 13 23 36,36 12
2 17 13 21 30 20 10 18.2 14 11 20 11 14 23 10 11 38 18 14 13,18 25 12 11 26 36,37 11
2 17 13 21 30 21 10 18.2 14 11 20 11 14 23 10 11 38 17 14 13,18 25 12 11 26 35,38 11
2 17 13 22 31 21 11 15 14 12 24 10 16 22 10 13 38 17 16 13,14 28 12 13 22 37,38 10
2 17 14 21 30 18 11 18 13 12 20 10 16 23 10 11 41 22 14 14,14 32 13 11 27 36,37 11

 There are no Ymax haplotypes or all haplotypes are singletons.

Discrete-Laplace frequency estimation (Minimal)

Release
R69
Loci included
DYS19, DYS389I, DYS389II*, DYS390, DYS391, DYS392, DYS393
Central haplotypes
9
EM converged
true
EM iterations
13
GLM method
internal_coef
Init method
pam
Threshold frequency
1 in 132,472
Per locus details
DL centers distribution (download PDF)
Table of haplotype centers (click to show/hide)
DYS19 DYS389I DYS389II* DYS390 DYS391 DYS392 DYS393
1 13 12 17 24 10 11 13
2 13 14 16 24 9 11 13
3 13 14 16 24 10 11 13
4 14 13 17 23 11 11 12
5 15 14 16 24 11 13 13
6 15 13 17 21 10 11 13
7 14 13 16 23 11 14 13
8 16 13 18 21 11 11 14
9 17 13 18 23 11 13 13

* Please note that DYS389I was substracted from DYS389II

Population studies

  • Mertens G., Jehaes E., Leijnen G., Rand S., Jacobs W. and Marck V. (2007), 'Twelve-locus Y-STR haplotypes in the Flemish population.', J Forensic Sci 52(3):755-7 [PubMed]
  • Cherni L., Pereira L., Goios A., Loueslati BY., El K., Gomes I., Gusmão L., Alves C., Slama A., Amorim A. and Elgaaied AB. (2005), 'Y-chromosomal STR haplotypes in three ethnic groups and one cosmopolitan population from Tunisia.', Forensic Sci Int 152(1):95-9 [PubMed] [DOI]
  • Aboukhalid R., Bouabdellah M., Abbassi M., Bentayebi K., Elmzibri M., Squalli D. and Amzazi S. (2010), 'Haplotype frequencies for 17 Y-STR loci (AmpFlSTRY-filer) in a Moroccan population sample.', Forensic Sci Int Genet 4(3):e73-4 [PubMed] [DOI]
  • Palet L., Coudray C., Galey C., Keyser C., Melhaoui M., Gagnor C., Sabatier M. and Dugoujon JM. (2010), 'Y-STR genetic diversity in Moroccans from the Figuig oasis.', Forensic Sci Int Genet 4(5):e139-41 [PubMed] [DOI]
  • Ottoni C., Larmuseau MH., Vanderheyden N., Martínez-Labarga C., Primativo G., Biondi G., Decorte R. and Rickards O. (2011), 'Deep into the roots of the Libyan Tuareg: a genetic survey of their paternal heritage.', Am J Phys Anthropol 145(1):118-24 [PubMed] [DOI]
  • D’Atanasio E., Iacovacci G., Pistillo R., Bonito M., Dugoujon JM., Moral P., El-Chennawi F., Melhaoui M., Baali A., Cherkaoui M., Sellitto D., Trombetta B., Berti A. and Cruciani F. (2018), 'Rapidly mutating Y-STRs in rapidly expanding populations: Discrimination power of the Yfiler Plus multiplex in northern Africa', Forensic Science International Genetics 38:185-94 [DOI]

Personal communication

YA005368
* See FAQ/Glossary (http://yhrd.org/pages/faq) for further explanations of abbreviated terms used here
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