Information on the Afro-Asiatic - Berber Metapopulation
The Berber Metapopulation (Afro-Asiatic - Berber) consists of 647 haplotypes (at least minimal) and 9 unique population samples.
Metapopulation substrcuture
Most common haplotypes
Count | DYS19 | DYS389I | DYS389II | DYS390 | DYS391 | DYS392 | DYS393 | DYS385 |
---|---|---|---|---|---|---|---|---|
92 | 13 | 14 | 30 | 24 | 9 | 11 | 13 | 13,14 |
28 | 13 | 14 | 30 | 24 | 10 | 11 | 13 | 13,14 |
22 | 13 | 14 | 30 | 24 | 9 | 11 | 13 | 13,15 |
16 | 13 | 14 | 31 | 24 | 9 | 11 | 13 | 13,14 |
16 | 16 | 13 | 31 | 21 | 11 | 11 | 14 | 15,17 |
15 | 13 | 13 | 29 | 24 | 9 | 11 | 13 | 13,14 |
13 | 13 | 14 | 30 | 24 | 9 | 11 | 13 | 14,14 |
12 | 13 | 14 | 30 | 23 | 9 | 11 | 13 | 13,14 |
11 | 17 | 13 | 31 | 23 | 11 | 13 | 13 | 11,12 |
9 | 13 | 14 | 30 | 24 | 9 | 11 | 14 | 13,14 |
Count | DYS391 | DYS389I | DYS439 | DYS389II | DYS438 | DYS437 | DYS19 | DYS392 | DYS393 | DYS390 | DYS385 |
---|---|---|---|---|---|---|---|---|---|---|---|
76 | 9 | 14 | 10 | 30 | 10 | 14 | 13 | 11 | 13 | 24 | 13,14 |
20 | 10 | 14 | 11 | 30 | 10 | 14 | 13 | 11 | 13 | 24 | 13,14 |
16 | 11 | 13 | 12 | 31 | 11 | 14 | 16 | 11 | 14 | 21 | 15,17 |
14 | 9 | 14 | 10 | 31 | 10 | 14 | 13 | 11 | 13 | 24 | 13,14 |
11 | 9 | 14 | 10 | 30 | 10 | 14 | 13 | 11 | 13 | 24 | 14,14 |
11 | 11 | 13 | 11 | 31 | 10 | 14 | 17 | 13 | 13 | 23 | 11,12 |
10 | 9 | 13 | 10 | 29 | 10 | 14 | 13 | 11 | 13 | 24 | 13,14 |
10 | 9 | 14 | 10 | 30 | 10 | 14 | 13 | 11 | 13 | 23 | 13,14 |
9 | 9 | 14 | 11 | 30 | 10 | 14 | 13 | 11 | 13 | 24 | 13,14 |
9 | 10 | 14 | 11 | 30 | 10 | 14 | 13 | 11 | 13 | 25 | 13,14 |
Count | DYS456 | DYS389I | DYS390 | DYS389II | DYS458 | DYS19 | DYS385 | DYS393 | DYS391 | DYS439 | DYS635 | DYS392 | YGATAH4 | DYS437 | DYS438 | DYS448 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9 | 15 | 14 | 24 | 30 | 18 | 13 | 13,14 | 13 | 9 | 10 | 21 | 11 | 12 | 14 | 10 | 20 |
8 | 13 | 13 | 23 | 31 | 16 | 17 | 11,12 | 13 | 11 | 11 | 17 | 13 | 11 | 14 | 10 | 20 |
7 | 16 | 14 | 24 | 30 | 18 | 13 | 13,14 | 13 | 9 | 10 | 21 | 11 | 12 | 14 | 10 | 20 |
7 | 16 | 14 | 24 | 30 | 18 | 13 | 13,14 | 13 | 10 | 11 | 21 | 11 | 12 | 14 | 10 | 20 |
7 | 16 | 14 | 24 | 30 | 18 | 13 | 13,14 | 14 | 9 | 11 | 21 | 11 | 12 | 14 | 10 | 20 |
5 | 15 | 12 | 23 | 29 | 16 | 14 | 13,16 | 12 | 10 | 11 | 21 | 11 | 11 | 15 | 9 | 20 |
5 | 15 | 14 | 24 | 30 | 17 | 13 | 13,14 | 13 | 9 | 10 | 21 | 11 | 12 | 14 | 10 | 20 |
5 | 15 | 14 | 25 | 30 | 17 | 15 | 13,14 | 13 | 11 | 12 | 23 | 13 | 12 | 14 | 12 | 19 |
5 | 16 | 15 | 24 | 31 | 18 | 13 | 13,14 | 13 | 9 | 11 | 21 | 11 | 13 | 14 | 10 | 20 |
4 | 14 | 13 | 23 | 30 | 18.2 | 14 | 13,18 | 12 | 11 | 11 | 21 | 11 | 11 | 14 | 10 | 20 |
There are no PowerPlex Y23 haplotypes or all haplotypes are singletons.
Count | DYS576 | DYS389I | DYS635 | DYS389II | DYS627 | DYS460 | DYS458 | DYS19 | YGATAH4 | DYS448 | DYS391 | DYS456 | DYS390 | DYS438 | DYS392 | DYS518 | DYS570 | DYS437 | DYS385 | DYS449 | DYS393 | DYS439 | DYS481 | DYF387S1 | DYS533 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | 17 | 14 | 21 | 30 | 18 | 11 | 18 | 13 | 12 | 20 | 9 | 15 | 24 | 10 | 11 | 42 | 22 | 14 | 13,14 | 33 | 13 | 10 | 27 | 36,37 | 11 |
4 | 19 | 15 | 21 | 31 | 18 | 11 | 18 | 13 | 13 | 20 | 9 | 16 | 24 | 10 | 11 | 42 | 22 | 14 | 13,14 | 32 | 13 | 11 | 27 | 36,37 | 11 |
3 | 15 | 12 | 21 | 28 | 19 | 11 | 19 | 15 | 11 | 22 | 10 | 16 | 22 | 10 | 11 | 38 | 21 | 16 | 12,14 | 27 | 14 | 12 | 21 | 36,37,38 | 9 |
3 | 16 | 14 | 21 | 31 | 12 | 10 | 15 | 16 | 12 | 19 | 10 | 16 | 21 | 11 | 10 | 40 | 20 | 14 | 15,17 | 32 | 13 | 11 | 25 | 36,37 | 11 |
3 | 18 | 14 | 22 | 30 | 18 | 11 | 19 | 13 | 12 | 20 | 9 | 16 | 23 | 10 | 11 | 41 | 23 | 14 | 13,14 | 32 | 13 | 10 | 25 | 36,38 | 12 |
2 | 14 | 13 | 22 | 29 | 18 | 10 | 17 | 14 | 10 | 19 | 10 | 15 | 23 | 9 | 15 | 35 | 19 | 14 | 14,15 | 35 | 13 | 13 | 23 | 36,36 | 12 |
2 | 17 | 13 | 21 | 30 | 20 | 10 | 18.2 | 14 | 11 | 20 | 11 | 14 | 23 | 10 | 11 | 38 | 18 | 14 | 13,18 | 25 | 12 | 11 | 26 | 36,37 | 11 |
2 | 17 | 13 | 21 | 30 | 21 | 10 | 18.2 | 14 | 11 | 20 | 11 | 14 | 23 | 10 | 11 | 38 | 17 | 14 | 13,18 | 25 | 12 | 11 | 26 | 35,38 | 11 |
2 | 17 | 13 | 22 | 31 | 21 | 11 | 15 | 14 | 12 | 24 | 10 | 16 | 22 | 10 | 13 | 38 | 17 | 16 | 13,14 | 28 | 12 | 13 | 22 | 37,38 | 10 |
2 | 17 | 14 | 21 | 30 | 18 | 11 | 18 | 13 | 12 | 20 | 10 | 16 | 23 | 10 | 11 | 41 | 22 | 14 | 14,14 | 32 | 13 | 11 | 27 | 36,37 | 11 |
There are no Maximal haplotypes or all haplotypes are singletons.
Population samples
Population Sample
Minimal
PowerPlex Y
Yfiler
PowerPlex Y23
Yfiler Plus
Maximal
Belgium [Moroccan Berber]
109 Haplotypes
109 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Tunisia [Berber]
30 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Rabat, Morocco [Berber]
69 Haplotypes
69 Haplotypes
69 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Figuig, Morocco [Berber]
52 Haplotypes
52 Haplotypes
52 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Fezzan, Libya [Tuareg]
47 Haplotypes
47 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Tripoli, Libya [Berber]
47 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
0 Haplotypes
Morocco [Asni, Bouhria, Souss, Ouarzazate Berber]
175 Haplotypes
175 Haplotypes
175 Haplotypes
0 Haplotypes
175 Haplotypes
0 Haplotypes
Algeria [Mozabite Berber]
64 Haplotypes
64 Haplotypes
64 Haplotypes
0 Haplotypes
64 Haplotypes
0 Haplotypes
Egypt [Siwa Berber]
54 Haplotypes
54 Haplotypes
54 Haplotypes
0 Haplotypes
54 Haplotypes
0 Haplotypes
(Overall)
647 Haplotypes
570 Haplotypes
414 Haplotypes
0 Haplotypes
293 Haplotypes
0 Haplotypes
Discrete-Laplace frequency estimation (Minimal)
- Release
- R63
- Loci included
- DYS19, DYS389I, DYS389II*, DYS390, DYS391, DYS392, DYS393
- Central haplotypes
- 9
- EM converged
- true
- EM iterations
- 13
- GLM method
- internal_coef
- Init method
- pam
- Per locus details
- DL centers distribution (download PDF)
Table of haplotype centers (click to show/hide)
DYS19
DYS389I
DYS389II*
DYS390
DYS391
DYS392
DYS393
1
13
12
17
24
10
11
13
2
13
14
16
24
9
11
13
3
13
14
16
24
10
11
13
4
14
13
17
23
11
11
12
5
15
14
16
24
11
13
13
6
15
13
17
21
10
11
13
7
14
13
16
23
11
14
13
8
16
13
18
21
11
11
14
9
17
13
18
23
11
13
13
Population Sample | Minimal | PowerPlex Y | Yfiler | PowerPlex Y23 | Yfiler Plus | Maximal |
---|---|---|---|---|---|---|
Belgium [Moroccan Berber] | 109 Haplotypes | 109 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Tunisia [Berber] | 30 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Rabat, Morocco [Berber] | 69 Haplotypes | 69 Haplotypes | 69 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Figuig, Morocco [Berber] | 52 Haplotypes | 52 Haplotypes | 52 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Fezzan, Libya [Tuareg] | 47 Haplotypes | 47 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Tripoli, Libya [Berber] | 47 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes | 0 Haplotypes |
Morocco [Asni, Bouhria, Souss, Ouarzazate Berber] | 175 Haplotypes | 175 Haplotypes | 175 Haplotypes | 0 Haplotypes | 175 Haplotypes | 0 Haplotypes |
Algeria [Mozabite Berber] | 64 Haplotypes | 64 Haplotypes | 64 Haplotypes | 0 Haplotypes | 64 Haplotypes | 0 Haplotypes |
Egypt [Siwa Berber] | 54 Haplotypes | 54 Haplotypes | 54 Haplotypes | 0 Haplotypes | 54 Haplotypes | 0 Haplotypes |
(Overall) | 647 Haplotypes | 570 Haplotypes | 414 Haplotypes | 0 Haplotypes | 293 Haplotypes | 0 Haplotypes |
DYS19 | DYS389I | DYS389II* | DYS390 | DYS391 | DYS392 | DYS393 | |
---|---|---|---|---|---|---|---|
1 | 13 | 12 | 17 | 24 | 10 | 11 | 13 |
2 | 13 | 14 | 16 | 24 | 9 | 11 | 13 |
3 | 13 | 14 | 16 | 24 | 10 | 11 | 13 |
4 | 14 | 13 | 17 | 23 | 11 | 11 | 12 |
5 | 15 | 14 | 16 | 24 | 11 | 13 | 13 |
6 | 15 | 13 | 17 | 21 | 10 | 11 | 13 |
7 | 14 | 13 | 16 | 23 | 11 | 14 | 13 |
8 | 16 | 13 | 18 | 21 | 11 | 11 | 14 |
9 | 17 | 13 | 18 | 23 | 11 | 13 | 13 |
* Please note that DYS389I was substracted from DYS389II